Department of Computational Medicine and Bioinformatics. Department of Computational Medicine and Bioinformatics. Center for Computational Medicine and Bioinformatics. Is a team of bioinformatics analysts, software developers, and IT staff dedicated to providing computing support, data infrastructure, and bioinformatics analysis to the University of Michigan.

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Well, I have had to move my blogging efforts to a different blog, and so will consider this my final post.

RNA-Enrich option for RNA-seq data. This relationship has been shown to bias gene set enrichment testing. RNA-Enrich accounts for this bias empirically. Adjusting for read counts per gene improves the type 1 error rate and power of the test. The use of logistic regression.

Is a widely used open source software tool for the analysis of bimolecular interaction networks. The power of Cytoscape is most apparent when it is coupled to databases of protein-protein, protein-DNA, and genetic interactions. Protein interaction data exists in many repositories, each with its own data format, molecule identifier and supplementary information. For chosen networks graphic match against biological pathways. This plug-in provides users an interactive mo.